Program & recorded talks

Program

Recorded talks

Keynote (45 mins)
Regular talk (15 mins)
Workshop lecture (30 mins)

Tuesday (Day 2)

Morning session

Sara Beery
Open Challenges in Generalizable Computer Vision for Ecology
Magali Frauendorf
Species and sex/age class identification models for trap cam images of Swedish wildlife
Jonas Hentati-Sundberg
Sensors and AI for automated seabird monitoring
Lars Holmberg
Ageing and sexing birds
Chris Cooney
Advancing the study of bird colour evolution using AI and computer vision

Afternoon session

Ben Weinstein
Towards general models for airborne ecological monitoring
Ben Weinstein
A short introduction to applied computer vision
Alexander Mathis
The basics of automated movement detection and pose estimation
Allison Hsiang
Building training datasets
Quentin Geissmann
DIY hardware for image/video acquisition
Sara Beery
The CV4Ecology program

Wednesday (Day 3)

Morning session

Christy Hipsley
Visualising evolution in 4D: prospects and challenges for large-scale CT datasets
Yichen He (for Anjali Goswami)
Biodiversity Phenomics: From Development to Deep Time
Yichen He
A Deep Learning Pipeline to Quantify Cranial Suture Morphology from 3D Scans
Sridhar Halali
Using micro-CT imaging to unravel the evolution of sensory traits in butterflies

Afternoon session

Allison Hsiang
Deep learning in deep time: Using computer vision and automation to study morphology and structure of microfossil communities
Meghan Balk
Assessing evolvability in a fossil lineage using a CV pipeline to produce phenomic data set
Roberta Hunt
Using AI to Generate Phylogenetic Trees from Images of Pinned Insects
Moritz Lürig
Mapping out morphospace in a color-polymorphic insect using deep learning
Masahito Tsuboi
What phenomics will and will not teach us

Thursday (Day 4)

Morning session

Alexander Mathis
Deep Learning Tools for the Analysis of Movement, Identity & Behavior
(same talk, but recorded on different occasion)
Valentin Gillet
From image stacks to neuronal connections: machine learning reveals insect neuroanatomy
Harshith Bachimanchi
Bringing microplankton to focus: Holography and deep learning
Hanbang Zou
Deep learning-based object detection for soil bacterial community analysis in microfluidics
Nikolay Oskolkov
Applications of Computer Vision for Studying Cell Morphology

Afternoon session

Seth Donoughe
Quantifying tissue traits to reveal how developmental mechanisms shape macroevolutionary trajectories
Matteo Redana
Use of videotracking to understand sub-critical thermal effects of freshwater macroinvertebrates
Erik Svensson
Using thermal imaging to study quantitative genetics and selection on plasticity and thermal adaptation

Friday (Day 5)

Morning session

Luca Pegoraro
Keynote: Luca Pegoraro - Towards automated insect monitoring in the wild: promises and challenges
Maja Tarka
Measuring multivariate beetle morphology in wild populations
Najmeh Abiri
Tick Species Classification Using Deep Learning Models: Challenges and Solutions in Citizen Science Projects
Ola Olsson
High-throughput quantitative pollen analysis based on computer vision and deep learning
Giuseppe Bianco
Engineering image acquisition for CV

Afternoon session

Quentin Geissmann
Insect Ecology in the Digital Age: Smart Traps and Automated Identification